REGENTS OF THE UNIVERSITY OF COLORADO, THE
The envelope of Gram-negative bacteria consists of two membranes separated by the periplasmic compartment that contains the peptidoglycan wall. The inner membrane (IM) is in contact with the cytosol while the outer membrane (OM) contacts the extracellular environment. The OM is a unique structure, essential for Gram-negative bacteria, composed of lipopolysaccharide (LPS), phospholipids and proteins. It is a very selective permeability barrier that allows the bacteria to survive in hostile environments such as the gut, where the OM resistance to bile salts allows enteric bacteria to thrive. The components of the OM are the first to come in contact with a host upon infection and strongly modulate the interaction of symbiotic and pathogenic bacteria with their host. A clear grasp of the OM biogenesis process is essential to understand host-pathogen interactions as well as a fundamental aspect of bacterial physiology. Outer membrane proteins (OMPs) are integral membrane proteins with 2-barrel structures embedded in the OM. Many OMPs are immunogenic and some of them serve as adhesins mediating adhesion and colonization of host tissues. OMPs are synthesized in the cytosol and translocated across the IM by the SEC translocation machinery. However, how these hydrophobic proteins cross the periplasm and insert specifically into the OM is poorly understood. A number of periplasmic proteins and one OMP (Omp85/YaeT) have been implicated in the transport and insertion of OMPs. In this proposal we will establish the mechanisms of OMP transport and assembly focusing on the following proteins: (i) the YaeT complex; a protein complex embedded in the outer membrane containing YaeT and the lipoproteins YfiO, YfgL, SmpA and NlpB, proposed to work as the machine inserting OMPs into the outer membrane; (ii) SurA, a periplasmic chaperone that facilitates OMP folding and insertion; and (iii) the Seventeen Kilodalton Protein (Skp); a trimeric periplasmic chaperone that prevents protein aggregation and is proposed to escort OMPs across the periplasm and assist in their insertion into membranes. A combination of crystallographic, NMR and biochemical approaches will be brought to bare on this crucial mechanistic problem. PUBLIC HEALTH RELEVANCE: Transport and assembly of outer membrane proteins is an essential process in bacteria required for viability. Interfering with this process can be an effective strategy for antibiotic development much like beta-lactams are effective by interfering with cell wall synthesis. This proposal is focused on understanding the mechanisms controlling transport and assembly of outer membrane proteins.
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| AWARD OVERVIEW |
| Award Number |
1R01AI080709-01 |
Funding Agency |
Department of Health and Human Services |
| Total Award Amount |
$740,796 |
Project Location - City |
Boulder |
| Award Date |
05/21/2009 |
Project Location - State |
CO |
| Project Status |
Completed |
Project Location - Zip |
80309-0572
|
| Jobs Reported |
2.00 |
Congressional District |
02 |
| Project Location - Country |
US |
|
|
Recipient Information
(Grants)
| Recipient Information (Grants) |
|
Recipient Name
|
REGENTS OF THE UNIVERSITY OF COLORADO, THE |
| Recipient DUNS Number |
007431505
|
| Recipient Address |
3100 MARINE ST 572 UCB |
| Recipient City |
BOULDER |
| Recipient State |
Colorado |
| Recipient Zip |
80303-1058 |
| Recipient Congressional District |
02 |
| Recipient Country |
USA |
Required to Report Top 5 Highly Compensated Officials |
No |
Projects and Jobs Information
| Projects and Jobs Information |
| Project Title |
Transport and Insertion of Outer Membrane Proteins |
| Project Status |
Completed |
| Final Project Report Submitted |
Yes |
| Project Activities Description |
Research & Public Policy Analysis |
| Quarterly Activities/Project Description |
This two-year project was focused on two specific Aims: (1) Determine High-Resolution Structures of YaeT Complex Components, and (2) Establish the YaeT Substrate Specificity. We completed the goals of Specific Aim 1. The crystal structure determination of YaeT periplasmic domain has been completed. Solution scattering and NMR data for the same system has been analyzed and a manuscript describing the findings is now published. Work to determine the NMR structure of BamC (NlpB) is complete and a manuscript has been published. We completed the structure determination of BamD and a manuscript is now published.
We have also completed the structure determination of BamB (YfgL) and a manuscript was submitted, additional experiments were requested in the review those experiments are now complete and the revised manuscript is being prepared.
Work on the goals of Specific Aim 2 has also been completed. Cloning and expression of a tagged form of YaeT for phage display screening is complete and we have carried out two rounds of panning for high affinity binders. The initial panning did not yield a consensus binder. We tested peptides containing the C-erminal “OMP signature” sing ITC. However, these peptides failed to produce high affinity binding to BamA. Production of a fluorescently tagged form of YaeT to study the dynamic behavior of this protein upon substrate binding is complete. We have detected FRET signal for these construct, which will enable the study of substrate-driven conformational changes in BamA. |
| Jobs Created |
2.00 |
| Description of Jobs Created |
Graduate StudentInvestigatorPost DoctorateResearch Assistant |
Purchaser Information
(Grants)
| Purchaser Information |
| Contracting Office ID |
Not Reported |
| Contracting Office Name |
Not Available |
| Contracting Office Region |
Not Available |
| TAS Major Program |
75-0900 |
| Award Information |
| Award Date |
05/21/2009 |
| Award Number |
1R01AI080709-01 |
| Order Number |
|
| Award Type |
Grants |
| Funding Agency ID |
75 |
| Funding Agency Name |
Department of Health and Human Services |
| Funding Office Name |
Not Available |
| Awarding Agency ID |
75 |
| Awarding Agency Name |
Department of Health and Human Services |
| Amount of Award |
$740,796 |
| Funds Invoiced/Received |
$740,796 |
| Expenditure Amount |
$740,796 |
| Infrastructure Expenditure Amount |
$0 |
| Infrastructure Purpose and Rationale |
Not Reported |
| Infrastructure Point of Contact Name |
Not Reported |
| Infrastructure Point of Contact Email |
Not Reported |
| Infrastructure Point of Contact Phone |
Not Reported |
| Infrastructure Point of Contact Address |
Not Reported |
| Infrastructure Point of Contact City |
Not Reported |
| Infrastructure Point of Contact State |
Not Reported |
| Infrastructure Point of Contact Zip |
Not Reported |
Product or Service Information
(Grants)
| Product or Service Information |
| Primary Activity Code |
**K |
| Activity Description |
Research & Public Policy Analysis |
| Sub-Awards Information |
| Sub-awards to Organizations |
0 |
| Sub-award Amounts to Organizations |
$0 |
| Sub-Awards to Individuals |
0 |
| Sub-Award Amounts to Individuals |
$0 |
| Number of Sub-awards less than $25,000/award |
0 |
| Amount of Sub-awards less than $25,000/award |
$0 |
| Number of payments to vendors greater than $25,000 |
0 |
| Total Amount of payments to vendors greater than $25,000/award |
$0 |
| Number of payments to vendors less than $25,000/award |
62 |
| Total Amount of payments to vendors less than $25,000/award |
$39,990 |
| Location Information |
| Latitude, Longitude |
40º 0' 22",
-105º 15' 55" |
| Congressional District |
02 |
| Address 1 |
3100 Marine St - Room 479 |
| Address 2 |
572 UCB |
| City |
Boulder |
| County |
Boulder |
| State |
CO |
| Zip |
80309-0572 |
|
|