RUSH UNIVERSITY MEDICAL CENTER
The overall goal of the proposed project is to explore the role of the brain histone epigenome in modulating the effect of life experiences on cognitive decline and dementia. In prior work, we found that while cognitive decline in old age often results from one or more of three common brain diseases, AD, cerebrovascular disease, and Lewy body disease, these conditions only account for about 20% of the variance of cognition in older persons. Thus, factors other than neuropathology must make important contributions to cognitive function in old age. Over the past decade, our group has identified a range of life experiences that affect an individual’s adult cognition but are not involved in the development of known age-related neuropathologic processes. A burgeoning literature suggests that the brain uses epigenetic marks as a means of linking experiential factors to stable behavioral changes including long term memory storage. We propose to conduct 835 epigenome wide histone acetylation scans on brain tissue from participants in an Exploratory Cohort (Rush Memory and Aging Project; R01AG17917) and a Confirmatory Cohort (Religious Orders Study (P30AG10161). The results of these epigenome-wide scans will be used in a programmatic series of analyses to explore the relation of the histone epigenome to detailed cognitive function tests and dementia status performed annually for up to 18 years, and to a wide range of life experiences (e.g., socioeconomic status, cognitive activities, psychological distress). The convergence of findings from these analyses will point to potential histone modifications linking life experiences to cognitive decline and dementia. In addition, the proposal will examine the relation of epigenetic marks to quantitative measures of the pathologic burden of the three most common causes of cognitive decline and dementia in old age. The histone data, along with available genome-wide genotyping (R01AG15819) and DNA methylation (R01AG36042) data on these subjects, will be made available to the research community to enable the investigation of fundamental genomic-epigenomic relationships to be explored for associations with a wide range of clinical and biologic phenotypes available in these cohorts. Together, this integrative proposal represents a timely, novel and powerful approach that will transform our understanding of epigenetic contributions to age-related loss of cognition and dementia in humans. We are not aware of any other studies of older men and women of comparable size, relevant life experiences, clinical data, and follow-up and autopsy rates, in which these analyses can be performed. Thus, the project is well positioned to greatly accelerate the pace of research on age-related cognitive decline and dementia that will lay the groundwork for a wide range of potential interventions that are truly distinct from approaches currently under investigation.
Choose a quarter and click "Go."
| AWARD OVERVIEW |
| Award Number |
1RC2AG036547-01 |
Funding Agency |
Department of Health and Human Services |
| Total Award Amount |
$998,322 |
Project Location - City |
Chicago |
| Award Date |
09/29/2009 |
Project Location - State |
IL |
| Project Status |
Completed |
Project Location - Zip |
60612-3244
|
| Jobs Reported |
0.55 |
Congressional District |
07 |
| Project Location - Country |
US |
|
|
Recipient Information
(Grants)
| Recipient Information (Grants) |
|
Recipient Name
|
RUSH UNIVERSITY MEDICAL CENTER |
| Recipient DUNS Number |
068610245
|
| Recipient Address |
1653 W CONGRESS PKWY |
| Recipient City |
CHICAGO |
| Recipient State |
Illinois |
| Recipient Zip |
60612-3839 |
| Recipient Congressional District |
07 |
| Recipient Country |
USA |
Required to Report Top 5 Highly Compensated Officials |
No |
Projects and Jobs Information
| Projects and Jobs Information |
| Project Title |
Cognitive Decline and Dementia: Life Experiences and the Brain Histone Epigenome |
| Project Status |
Completed |
| Final Project Report Submitted |
Yes |
| Project Activities Description |
Alzheimer Disease Research |
| Quarterly Activities/Project Description |
Quarterly update - Overall, we produced ChIP-seq data on 694 post mortem, frozen DLPF cortex specimens. These passed into a strict quality control and analysis pipeline. Initial analyses examining the BIN1 gene associated with AD show that H3K9ac peaks are primarily around the promoter of the BIN1 gene, which is expected for a gene known to be expressed in the DLPFC. Based on the distribution of peaks in the vicinity of BIN1, we clustered the subjects into one of five classes which have a distinct profile of H3K9Ac peaks. Analyses to relate these differences in the distribution of H3K9Ac peaks will be conducted both in regions associated with pertinent syndromic phenotypes (such as BIN1 and AD) and, secondarily, genome-wide to identify novel loci that relate to the phenotypes of interest. Future analyses will interrogate other known AD loci and risk factor for AD to nominate novel genes involved in AD. |
| Jobs Created |
0.55 |
| Description of Jobs Created |
Two positions were retained and one Research Associate position was created. |
Purchaser Information
(Grants)
| Purchaser Information |
| Contracting Office ID |
Not Reported |
| Contracting Office Name |
Not Available |
| Contracting Office Region |
Not Available |
| TAS Major Program |
75-0842 |
| Award Information |
| Award Date |
09/29/2009 |
| Award Number |
1RC2AG036547-01 |
| Order Number |
|
| Award Type |
Grants |
| Funding Agency ID |
75 |
| Funding Agency Name |
Department of Health and Human Services |
| Funding Office Name |
Not Available |
| Awarding Agency ID |
75 |
| Awarding Agency Name |
Department of Health and Human Services |
| Amount of Award |
$998,322 |
| Funds Invoiced/Received |
$998,322 |
| Expenditure Amount |
$998,322 |
| Infrastructure Expenditure Amount |
$0 |
| Infrastructure Purpose and Rationale |
Not Reported |
| Infrastructure Point of Contact Name |
Not Reported |
| Infrastructure Point of Contact Email |
Not Reported |
| Infrastructure Point of Contact Phone |
Not Reported |
| Infrastructure Point of Contact Address |
Not Reported |
| Infrastructure Point of Contact City |
Not Reported |
| Infrastructure Point of Contact State |
Not Reported |
| Infrastructure Point of Contact Zip |
Not Reported |
Product or Service Information
(Grants)
| Product or Service Information |
| Primary Activity Code |
H02.15.02 |
| Activity Description |
Alzheimer Disease Research |
| Sub-Awards Information |
| Sub-awards to Organizations |
1 |
| Sub-award Amounts to Organizations |
$176,902 |
| Sub-Awards to Individuals |
0 |
| Sub-Award Amounts to Individuals |
$0 |
| Number of Sub-awards less than $25,000/award |
0 |
| Amount of Sub-awards less than $25,000/award |
$0 |
| Number of payments to vendors greater than $25,000 |
0 |
| Total Amount of payments to vendors greater than $25,000/award |
$0 |
| Number of payments to vendors less than $25,000/award |
8 |
| Total Amount of payments to vendors less than $25,000/award |
$25,991 |
Sub-award 1RC2AG036547-01 - BROAD INSTITUTE, INC., THE
| Sub-Award Amount |
$176,902 |
| Sub-Award Date |
11/03/2009 |
| Sub-Awards Disbursed |
$176,902.00 |
| Project Location - City |
Cambridge |
| Project Location - State |
MA |
| Project Location - Zip Code |
02142-1401 |
| Project Location - Congressional District |
08 |
| Sub-Recipient DUNS Number |
623544785
|
| Sub-Recipient Address |
7 CAMBRIDGE CTR |
| Sub-Recipient City |
CAMBRIDGE |
| Sub-Recipient State |
Massachusetts |
| Sub-Recipient Zip Code |
02142-1401 |
| Sub-Recipient Congressional District |
08 |
Required To Report Top 5 Highly Compensated Officials |
No |
| Location Information |
| Latitude, Longitude |
41º 52' 39",
-87º 40' 4" |
| Congressional District |
07 |
| Address 1 |
|
| Address 2 |
|
| City |
Chicago |
| County |
Cook |
| State |
IL |
| Zip |
60612-3244 |
|
|