Grants - AWARD SUMMARY


UNIVERSITY OF CALIFORNIA, SAN DIEGO


This application is submitted by a group of investigators at 9 sites distributed throughout the U.S. where there are active developmental research programs involving substantial numbers of typically developing children, and neuroimaging investigators with experience in multi-site imaging initiatives. We propose to join forces to leverage these ongoing pediatric studies to assemble, over a period of 2 years, a large, cross- sectional imaging-genomics dataset to be used as a shared resource. The major aim of our proposal is to create a database that will include genome-wide association results for a large number of neural architectural phenotypes obtained using multimodal structural imaging. We propose to offer this database - essentially a map depicting the genomic landscape of the developing human brain - as a resource to the scientific community. Across the sites, investigators will administer the brief NIH Neuroscience Blueprint Toolbox Cognitive assessment; acquire standardized structural and diffusion images, and collect DNA samples in 1575 children and adolescents who are participants in their ongoing studies. The DNA samples will be shipped to a central Genetics Core for analysis, the imaging data will be uploaded for quality control and computational morphometry by the Imaging Core, and other data will be uploaded to the Coordinating Core, where an aggregate database of demographic, behavioral, imaging, and genomics deliverables will be compiled from 1400 individuals and maintained for shared access. A large, cross-sectional pediatric dataset would fill a significant gap that currently prevents description of gene and gene-by-age effects on neural architecture in children (i.e., main effects of genetic variation and gene effects on developmental trajectories) that are likely to be relevant to variability in behavioral and neuropsychiatric outcomes. Preliminary results of analyses of large adult cohorts suggest that common genetic variation accounts for substantial variability in brain morphology. The age-span of participants in these studies has made it possible to detect gene-by-age interactions relevant to variability in brain aging. Unfortunately because there are no well-powered studies with data from individuals spanning the childhood and adolescent age range, it is not known whether these neural phenotypes are present in children; and if they are, whether they can be observed early in development or evolve as ongoing remodeling of neural structures proceeds during childhood. This project would address the discrepancy between currently available imaging-genetics data in children of different ages and those available in adults. In addition to providing an informative data resource, the project would create a collaborative hub of investigators prepared to participate in an imaging- genomics adjunct study of the National Children's Study, which is in the early planning stages at this time.

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AWARD OVERVIEW

AWARD OVERVIEW
Award Number 1RC2DA029475-01 Funding Agency Department of Health and Human Services
Total Award Amount $8,950,690 Project Location - City La Jolla
Award Date 09/30/2009 Project Location - State CA
Project Status More than 50% Completed Project Location - Zip 92093-0934
Jobs Reported 5.58 Congressional District 49
Project Location - Country US

Recipient Information (Grants)

Recipient Information (Grants)
Recipient Name UNIVERSITY OF CALIFORNIA, SAN DIEGO
Recipient DUNS Number 804355790
Recipient Address 9500 GILMAN DR DEPT 621
Recipient City LA JOLLA
Recipient State California
Recipient Zip 92093-0621
Recipient Congressional District 49
Recipient Country USA
Required to Report Top 5
Highly Compensated Officials
No

Projects and Jobs Information

Projects and Jobs Information
Project Title CREATING A PEDIATRIC IMAGING-GENOMICS DATA RESOURCE
Project Status More than 50% Completed
Final Project Report Submitted No
Project Activities Description Colleges, Universities, and Professional Schools
Quarterly Activities/Project Description The Coordinating Core (CC) continues to manage and develop the PING Portal and process applications for ongoing data analysis by investigators within the consortium. This process has resulted in many improvements including: providing the ability to calculate interaction effects as vertex maps of the cortical surface; improve the Portal statistical reports to provide user-requested effect summaries; improve user control of color and contrast for Portal visualization; provide visualization of actual geometric deformation of aligned brain surfaces in both hemispheres; improve download utilities. The Core also managed regular teleconferences and working group meetings for data analysis, training in Portal use, infrastructure development, and curation of the existing database. CC continues to track data use requests, reports, submissions, and publications and to maintain the PING web interface. The Image Processing Core has received a total of approximately 1400 data sets, and the preliminary data generated from these scans have been uploaded to the PING website for use by all researchers involved in the project. The Image Processing Core continues to refine and improve its analysis tools in order to derive new measures to create a richer data set and maximize the amount of usable data. The Genomics Core has received a total of 1452 saliva samples. DNA has been isolated from all saliva samples and 1440 of them passed QC (total DNA yield >=3 ug). The GC has released the final genomic data set to PING investigators, which includes ancestry estimates, imputations, and genotype data for 1406 PING subjects. A similar data set that will include only subjects with appropriate informed consent will be made publicly available through the PING Coordinating Core.
Jobs Created 5.58
Description of Jobs Created For the prime recipient, ARRA funds were used to support five investigators at 0.80 FTE, five programmers at 2.30 FTE, and 2 research staff at 0.35 FTE. For the subrecipients, ARRA funds were used to support: Cornell ? one PI at 0.12 FTE; one research associate at 0.25 FTE, and one graduate student at 0.50 FTE; Yale ? one PI at 0.18 FTE; Scripps ? one Research Scientist at 0.08 FTE; U of Hawaii ? one postdoctoral researcher at 1.00 FTE.


Purchaser Information (Grants)

Purchaser Information
Contracting Office ID Not Reported
Contracting Office Name Not Available
Contracting Office Region Not Available
TAS Major Program 75-0908

Award Information

Award Information
Award Date 09/30/2009
Award Number 1RC2DA029475-01
Order Number
Award Type Grants
Funding Agency ID 75
Funding Agency Name Department of Health and Human Services
Funding Office Name Not Available
Awarding Agency ID 75
Awarding Agency Name Department of Health and Human Services
Amount of Award $8,950,690
Funds Invoiced/Received $8,435,325
Expenditure Amount $8,478,911
Infrastructure Expenditure Amount $0
Infrastructure Purpose and Rationale Not Reported
Infrastructure Point of Contact Name Not Reported
Infrastructure Point of Contact Email Not Reported
Infrastructure Point of Contact Phone Not Reported
Infrastructure Point of Contact Address Not Reported
Infrastructure Point of Contact City Not Reported
Infrastructure Point of Contact State Not Reported
Infrastructure Point of Contact Zip Not Reported

Product or Service Information (Grants)

Product or Service Information
Primary Activity Code 611310
Activity Description Colleges, Universities, and Professional Schools

Sub-Awards Information

Sub-Awards Information
Sub-awards to Organizations 10
Sub-award Amounts to Organizations $4,831,591
Sub-Awards to Individuals 1
Sub-Award Amounts to Individuals $10,000
Number of Sub-awards less than $25,000/award 0
Amount of Sub-awards less than $25,000/award $0
Number of payments to vendors greater than $25,000 1
Total Amount of payments to vendors greater than $25,000/award $214,467
Number of payments to vendors less than $25,000/award 28
Total Amount of payments to vendors less than $25,000/award $72,716


Sub-Award Transactions

Sub-award 10303998 - HUGO W. MOSER RESEARCH INSTITUTE AT KENNEDY KRIEGER, INC.

Sub-Award Amount $445,323
Sub-Award Date 01/22/2010
Sub-Awards Disbursed $445,322.78
Project Location - City Baltimore
Project Location - State MD
Project Location - Zip Code 21205-1832
Project Location - Congressional District 07
Sub-Recipient DUNS Number 155342439
Sub-Recipient Address 707 N BROADWAY
Sub-Recipient City BALTIMORE
Sub-Recipient State Maryland
Sub-Recipient Zip Code 21205-1832
Sub-Recipient Congressional District 07
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10303682 - MASSACHUSETTS GENERAL HOSPITAL, THE

Sub-Award Amount $521,442
Sub-Award Date 01/26/2010
Sub-Awards Disbursed $521,442.00
Project Location - City Boston
Project Location - State MA
Project Location - Zip Code 02114-2621
Project Location - Congressional District 08
Sub-Recipient DUNS Number 073130411
Sub-Recipient Address 55 FRUIT ST
Sub-Recipient City BOSTON
Sub-Recipient State Massachusetts
Sub-Recipient Zip Code 02114-2621
Sub-Recipient Congressional District 08
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10304445 - SCRIPPS HEALTH

Sub-Award Amount $858,653
Sub-Award Date 03/01/2010
Sub-Awards Disbursed $852,447.00
Project Location - City La Jolla
Project Location - State CA
Project Location - Zip Code 92037-1024
Project Location - Congressional District 49
Sub-Recipient DUNS Number 131185241
Sub-Recipient Address 4275 CAMPUS POINT COURT CP215
Sub-Recipient City SAN DIEGO
Sub-Recipient State California
Sub-Recipient Zip Code 92121-1513
Sub-Recipient Congressional District 52
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10321292 - THE CHILDRENS HOSPITAL LOS ANGELES

Sub-Award Amount $33,600
Sub-Award Date 04/04/2012
Sub-Awards Disbursed $0.00
Project Location - City Los Angles
Project Location - State CA
Project Location - Zip Code 90027-6062
Project Location - Congressional District 28
Sub-Recipient DUNS Number 052277936
Sub-Recipient Address 4650 W SUNSET BLVD
Sub-Recipient City LOS ANGELES
Sub-Recipient State California
Sub-Recipient Zip Code 90027-6062
Sub-Recipient Congressional District 28
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 81449 - UNIVERSITY OF CALIFORNIA, DAVIS

Sub-Award Amount $435,820
Sub-Award Date 11/30/2009
Sub-Awards Disbursed $362,112.58
Project Location - City Davis
Project Location - State CA
Project Location - Zip Code 95616-5270
Project Location - Congressional District 03
Sub-Recipient DUNS Number 047120084
Sub-Recipient Address 1850 RESEARCH PARK DR, STE 300
Sub-Recipient City DAVIS
Sub-Recipient State California
Sub-Recipient Zip Code 95618-6134
Sub-Recipient Congressional District 03
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 29006 - UNIVERSITY OF CALIFORNIA, LOS ANGELES

Sub-Award Amount $348,040
Sub-Award Date 11/30/2009
Sub-Awards Disbursed $163,235.37
Project Location - City Los Angeles
Project Location - State CA
Project Location - Zip Code 90095-9000
Project Location - Congressional District 33
Sub-Recipient DUNS Number 092530369
Sub-Recipient Address 11000 KINROSS AVE STE 102
Sub-Recipient City LOS ANGELES
Sub-Recipient State California
Sub-Recipient Zip Code 90095-2000
Sub-Recipient Congressional District 33
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10304444 - UNIVERSITY OF HAWAII SYSTEMS

Sub-Award Amount $993,579
Sub-Award Date 02/10/2010
Sub-Awards Disbursed $858,747.58
Project Location - City Honolulu
Project Location - State HI
Project Location - Zip Code 96822-2309
Project Location - Congressional District 01
Sub-Recipient DUNS Number 965088057
Sub-Recipient Address 2425 CAMPUS RD SINCLAIR LIBRARY RM 1
Sub-Recipient City HONOLULU
Sub-Recipient State Hawaii
Sub-Recipient Zip Code 96822-2247
Sub-Recipient Congressional District 01
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10303638 - UNIVERSITY OF MASSACHUSETTS

Sub-Award Amount $304,119
Sub-Award Date 03/16/2010
Sub-Awards Disbursed $287,476.45
Project Location - City Worcester
Project Location - State MA
Project Location - Zip Code 01655-0002
Project Location - Congressional District 02
Sub-Recipient DUNS Number 603847393
Sub-Recipient Address 55 LAKE AVE N
Sub-Recipient City WORCESTER
Sub-Recipient State Massachusetts
Sub-Recipient Zip Code 01655-0002
Sub-Recipient Congressional District 02
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10303637 - WEILL MEDICAL COLLEGE OF CORNELL UNIVERSITY

Sub-Award Amount $412,851
Sub-Award Date 02/24/2010
Sub-Awards Disbursed $288,183.82
Project Location - City New York
Project Location - State NY
Project Location - Zip Code 10065-4805
Project Location - Congressional District 12
Sub-Recipient DUNS Number 060217502
Sub-Recipient Address 1300 YORK AVE
Sub-Recipient City NEW YORK
Sub-Recipient State New York
Sub-Recipient Zip Code 10065-4805
Sub-Recipient Congressional District 12
Required To Report Top 5
Highly Compensated Officials
No

Sub-award 10303636 - YALE UNIVERSITY

Sub-Award Amount $478,165
Sub-Award Date 02/17/2010
Sub-Awards Disbursed $477,855.82
Project Location - City New Haven
Project Location - State CT
Project Location - Zip Code 06520-8064
Project Location - Congressional District 03
Sub-Recipient DUNS Number 043207562
Sub-Recipient Address 105 WALL ST
Sub-Recipient City NEW HAVEN
Sub-Recipient State Connecticut
Sub-Recipient Zip Code 06511-6614
Sub-Recipient Congressional District 03
Required To Report Top 5
Highly Compensated Officials
No


Vendor Transactions

ILLUMINA, INC. - Award Number 1RC2DA029475-01 - ILLUMINA, INC.

Award Number 1RC2DA029475-01
Sub-Award Number N/A
Vendor DUNS Number 033305264
Vendor HQ Zip Code + 4 92122
Vendor Name ILLUMINA, INC.
Product and Service Description Bead Chip Analysis kits
Payment Amount $214,467



Project Location Detail

Location Information
Latitude, Longitude 32º 52' 21", -117º 14' 15"
Congressional District 49
Address 1 University of California, San Diego
Address 2 9500 Gilman Drive, Mail Code 0934
City La Jolla
County San Diego
State CA
Zip 92093-0934
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